Prof. Dr. rer. nat. habil. Tom Goldammer

+49 38208 68-702
Research Institute for Farm Animal Biology (FBN)
Institute of Genome Biology
Fish Genetics Unit
Wilhelm-Stahl-Allee 2
18196 Dummerstorf

Research interests

Genome biological principles of adaptation capability, robustness, and of mechanisms of the innate immune system in fish under influence of various stress factors in aquaculture

Curriculum Vitae

  • since 2019: University Professor for Molecular Biology and Fish Genetics, Faculty of Agricultural and Environmental Sciences, University of Rostock
  • 2016–2018: Acting Head of Institute of Genome Biology, FBN Dummerstorf
  • since 2008: Team Leader of Fish Genetics Unit, FBN Dummerstorf
  • 2005–2019: Private Lecturer (Genetics), University of Rostock
  • 2005: Habilitation and Venia legendi (Genetics), University of Rostock
  • 2001–2008: Senior Research Scientist, FBN Dummerstorf
  • 1999–2001: Postdoctoral Research Fellow, Texas A&M University, Dept. Veterinary Pathobiology, Texas, USA, (Prof. J. Womack)
  • 1996: Dr. rer. nat. (Genetics), University of Rostock (Prof. M. Schwerin)
  • 1992–1999: Research Scientist, FBN Dummerstorf
  • 1991–1992: Research Scientist, University of Rostock
  • 1991: Diploma (Biology), University of Rostock
  • 1986–1991: Studies in Marine Ecology, University of Rostock

Professional Activities

  • since 2009: Coordinator of Campus BioFISCH MV (Projects of EFF & ESF)
  • since 2009:Editorial Advisory Board Member of Chromosome Research
  • since 2006: International Society for Animal Genetics (ISAG)
  • 2000–2001: Texas Genetics Society (TGS)

Teaching

MSc Aquaculture, Module 5 – Part: Fish Genetics (Classes and practical course)

Publications

Schäfer, N.; Kaya, Y.; Rebl, H.; Stüecken, M.; Rebl, A.; Nguinkal, J.A.; Franz, G. P.; Brunner, R. M.; Goldammer, T.; Grunow, B.; Verleih, M. (2021):
Insights into early ontogenesis: characterization of stressand development key genes of pikeperch (Sander lucioperca) in vivo and in vitro. Fish Physiol Biochem 47 (2): 515-532
Schäfer, N.; Matoušek, J.; Rebl, A.; Stejskal, V.; Brunner, R. M.; Goldammer, T.; Verleih, M.; Korytar, T. (2021):
Effects of Chronic Hypoxia on the Immune Status of Pikeperch (Sander lucioperca Linnaeus, 1758). Biology 10 (7): 649, 1-19
Galow, A.-M.; Kussauer, S.K; Wolfien, M.; Brunner, R. M.; Goldammer, T.; Hoeflich, A.; David, R. (2021):
Quality control in scRNA-Seq can discriminate pacemaker cells: the mtRNA bias. Cell Mol Life Sci 78: 1-8
Nguinkal, J.A.; Verleih, M.; de los Rios Pérez, L.; Brunner, R. M.; Sahm, A.; Bej, S.; Rebl, A.; Goldammer, T. (2021):
Comprehensive characterization of multitissue expression landscape, co-expression networks and positive selection in pikeperch. Cells-Basel
Goldammer, T.; Verleih, M.; Brunner, R. M.; Rebl, A.; Nguinkal, J.A.; de los Rios Pérez, L.; Schäfer, N.; Stüecken, M.; Swirplies, F.; Wittenburg, D. (2021):
Pikeperch genome data – basis for the smart farming in aquaculture. Mitteilungen der Landesforschungsanstalt für Landw (63): 125-133
Martorell Ribera, J.; Nipkow, M.; Viergutz, T.; Brunner, R. M.; Bochert, R.; Koll, R.; Goldammer, T.; Gimsa, U.; Rebl, A. (2020):
Early response of salmonid head-kidney cells to stress hormones and toll-like receptor ligands. Fish Shellfish Immun 98: 950-961
Koll, R.; Martorell Ribera, J.; Brunner, R. M.; Rebl, A.; Goldammer, T. (2020):
Gene profiling in the adipose fin of salmonid fishes supports its function as a flow sensor. Genes-Basel 11 (1): 21, 1-22
Wolfien, MW; Galow, A.-M.; Müller, P.; Bartsch, M.; Brunner, R. M.; Goldammer, T.; Wolkenhauer, O.; Höflich, A.; David, R. (2020):
Single-nucleus sequencing of an entire mammalian heart: cell type composition and velocity. Cells-Basel 9 (2): 318,1-6
Wolfien, M.; Galow, A.-M.; Müller, P.; Bartsch, M.; Brunner, R. M.; Goldammer, T.; Wolkenhauer, O.; Höflich, A.; David, R. (2020):
Single nuclei sequencing of entire mammalian hearts: strain-dependent cell type composition and velocity. Cardiovasc Res 116 (7): 1249-1251
Galow, A.-M.; Wolfien, M.; Müller, P.; Bartsch, M.; Brunner, R. M.; Hoeflich, A.; Wolkenhauer, O.; David, R.; Goldammer, T. (2020):
Integrative cluster analysis of whole hearts reveals proliferative cardiomyocytes in adult mice. Cells-Basel 9 (5): 1144,1-16
Sarais, F.; Rebl, H.; Verleih, M.; Ostermann, S.; Krasnov, A.; Köllner, B.; Goldammer, T.; Rebl, A. (2020):
Characterisation of the teleostean κB-Ras family: The two members NKIRAS1 and NKIRAS2 from rainbow trout influence the activity of NF-κB in opposite ways. Fish Shellfish Immun 106: 1004-1013
Rebl, A.; Korytár, T.; Borchel, A.; Bochert, R.; Strzelczyk, J.; Goldammer, T.; Verleih, M. (2020):
The synergistic interaction of thermal stress coupled with overstocking strongly modulates the transcriptomic activity and immune capacity of rainbow trout (Oncorhynchus mykiss). Sci Rep-UK 10: 14913, 1-15
de los Rios Pérez, L.; Brunner, R. M.; Hadlich, F.; Rebl, A.; Kühn, C.; Wittenburg, D.; Goldammer, T.; Verleih, M. (2020):
Comparative analysis of the transcriptome and distribution of putative SNPs in two rainbow trout (Oncorhynchus mykiss) breeding strains by using next-generation sequencing. Genes-Basel 11: 841, 1-16
Martorell Ribera, J.; Venuto, M.; Otten, W.; Brunner, R. M.; Goldammer, T.; Rebl, A.; Gimsa, U. (2020):
Time-dependent effects of acute handling on the brain monoamine system of the Salmonid Coregonus maraena. FRONT NEUROSCI-SWITZ 14: 1293, 1-18
Galow, A.-M.; Goldammer, T.; Hoeflich, A. (2020):
Xenogeneic and stem cell-based therapy for cardiovascular diseases: genetic engineering of porcine cells and their applications in heart regeneration. Int J Mol Sci 21 (24): 9686, 1-22
de los Rios Pérez, L.; Nguinkal, J.A.; Verleih, M.; Rebl, A.; Brunner, R. M.; Klosa, J.; Schäfer, N.; Stüeken, M.; Goldammer, T.; Wittenburg, D. (2020):
An ultra-high density SNP-based linkage map for enhancing the pikeperch (Sander lucioperca) genome assembly to chromosome-scale. Sci Rep-UK 10 (22335): 1-13
Swirplies, F.; Würtz, S.; Baßmann, B.; Orban, A.; Schäfer, N.; Brunner, R. M.; Hadlich, F.; Goldammer, T.; Rebl, A. (2019):
Identification of molecular stress indicators in pikeperch Sander lucioperca correlating with rising water temperatures. Aquaculture 501: 260-271
Rebl, A.; Rebl, H.; Verleih, M.; Haupt, S.; Goldammer, T.; Seyfert, H.-M. (2019):
At least two genes encode many variants of Irak3 in rainbow trout, but neither the full-length factor nor its variants interfere directly with the TLR-mediated stimulation of inflammation. Front Immunol 10: 2246, 1-19
Montero, R.; Strzelczyk, J.; Tze Ho Chan, J.; Verleih, M.; Rebl, A.; Goldammer, T.; Köllner, B.; Korytár, T. (2019):
Dawn to dusk: Diurnal rhythm of the immune response in rainbow trout (Oncorhynchus mykiss). Biology 9 (1): 8, 1-13
Verleih, M.; Borchel, A.; Rebl, A.; Brenmoehl, J.; Kühn, C.; Goldammer, T. (2019):
A molecular survey of programmed cell death in rainbow trout: Structural and functional specifications of apoptotic key molecules. Comp Biochem Phys B 230: 57-69