Dr. agr. Ronald Brunner
+49 38208 68-702
Research Institute for Farm Animal Biology (FBN)
Institute of Genome Biology
Wilhelm-Stahl-Allee 2
18196 Dummerstorf
Institute of Genome Biology
Wilhelm-Stahl-Allee 2
18196 Dummerstorf
Research interests
- structural and functional characterization of micro-RNA via Illumina-NGS in infected mammary gland;
- comparative transcriptome sequencing in teleost fishes;
- chromosome structure and behaviour
Curriculum Vitae
- 1992–present: Scientist, Genomics Unit, Research Institute for Farm Animal Biology (FBN)
- 1989–1991: Postdoctoral Fellow, Institute for Animal breeding, University of Rostock, Germany
- 1989: Ph.D. in Agricultural Science
- 1985–1989: PhD Student, Institute for Animal breeding, University of Rostock, Germany
- 1985: Diploma, University of Rostock, Germany
- 1980–1985: Studies in Agricultural Science, University of Rostock, Germany
Publications
Martorell Ribera, J.; Koczan, D.; Venuto, M. T.; Viergutz, T.; Brunner, R. M.; Goldammer, T.; Gimsa, U.; Rebl, A. (2022):
Experimental Handling Challenges Result in Minor Changes in the Phagocytic Capacity and Transcriptome of Head-Kidney Cells of the Salmonid Fish Coregonus maraena. Front Vet Sci 9: 889635, 1-14
https://doi.org/10.3389/fvets.2022.889635
Magray, A. R.; Martorell Ribera, J.; Isernhagen, L.; Galuska, S. P.; Günther, J.; Verleih, M.; Viergutz, T.; Brunner, R. M.; Ganai, B.; Ahmad, F.; Zlatina, K.; Rebl, A. (2022):
Evaluation of blood cell viability rate, gene expression, and O-GlcNAcylation profiles as indicative signatures for fungal stimulation of salmonid cell models. MOL IMMUNOL 142: 120-129
Alexander Rebl,
Kristina Zlatina,
Ronald Brunner,
Marieke Verleih,
Juliane Günther,
Christina Galuska,
Sebastian Peter Galuska
https://doi.org/10.1016/j.molimm.2021.12.019
Goldammer, T.; Verleih, M.; Brunner, R. M.; Rebl, A.; Nguinkal, J. A.; de los Rios Pérez, L.; Schäfer, N.; Stüecken, M.; Swirplies, F.; Wittenburg, D. (2021):
Pikeperch genome data – basis for the smart farming in aquaculture. Mitteilungen der Landesforschungsanstalt für Landw (63): 125-133
https://www.landwirtschaft-mv.de/static/LFA/Dateien/Hefte/MdLFA_Heft63.pdf
Nguinkal, J. A.; Verleih, M.; de los Rios Pérez, L.; Brunner, R. M.; Sahm, A.; Bej, S.; Rebl, A.; Goldammer, T. (2021):
Comprehensive Characterization of Multitissue Expression Landscape, Co-Expression Networks and Positive Selection in Pikeperch. Cells-Basel 11 (9): 610353, 1-16
https://doi.org/10.3390/cells10092289
Galow, A.-M.; Kussauer, S.K; Wolfien, M.; Brunner, R. M.; Goldammer, T.; Hoeflich, A.; David, R. (2021):
Quality control in scRNA-Seq can discriminate pacemaker cells: the mtRNA bias. Cell Mol Life Sci 78: 6585-6592
https://doi.org/10.1007/s00018-021-03916-5
Schäfer, N.; Matoušek, J.; Rebl, A.; Stejskal, V.; Brunner, R. M.; Goldammer, T.; Verleih, M.; Korytář, T. (2021):
Effects of Chronic Hypoxia on the Immune Status of Pikeperch (Sander lucioperca Linnaeus, 1758). BIOLOGY-BASEL 10 (7): 649, 1-19
https://doi.org/10.3390/biology10070649
Schäfer, N.; Kaya, Y.; Rebl, H.; Stüecken, M.; Rebl, A.; Nguinkal, J. A.; Franz, G. P.; Brunner, R. M.; Goldammer, T.; Grunow, B.; Verleih, M. (2021):
Insights into early ontogenesis: characterization of stressand development key genes of pikeperch (Sander lucioperca) in vivo and in vitro. Fish Physiol Biochem 47 (2): 515-532
https://doi.org/10.1007/s10695-021-00929-6
de los Rios Pérez, L.; Nguinkal, J. A.; Verleih, M.; Rebl, A.; Brunner, R. M.; Klosa, J.; Schäfer, N.; Stüeken, M.; Goldammer, T.; Wittenburg, D. (2020):
An ultra-high density SNP-based linkage map for enhancing the pikeperch (Sander lucioperca) genome assembly to chromosome-scale. Sci Rep-UK 10 (22335): 1-13
https://doi.org/10.1038/s41598-020-79358-z
Martorell Ribera, J.; Venuto, M. T.; Otten, W.; Brunner, R. M.; Goldammer, T.; Rebl, A.; Gimsa, U. (2020):
Time-dependent effects of acute handling on the brain monoamine system of the Salmonid Coregonus maraena. FRONT NEUROSCI-SWITZ 14: 1293, 1-18
https://doi.org/10.3389/fnins.2020.591738
de los Rios Pérez, L.; Brunner, R. M.; Hadlich, F.; Rebl, A.; Kühn, C.; Wittenburg, D.; Goldammer, T.; Verleih, M. (2020):
Comparative analysis of the transcriptome and distribution of putative SNPs in two rainbow trout (Oncorhynchus mykiss) breeding strains by using next-generation sequencing. Genes-Basel 11: 841, 1-16
https://doi.org/10.3390/genes11080841
Knaust, J.; Weikard, R.; Albrecht, E.; Brunner, R. M.; Günther, J.; Kühn, C. (2020):
Indication of premelanosome protein (PMEL) expression outside of pigmented bovine skin suggests functions beyond eumelanogenesis. Genes-Basel 11 (7): 788,1-13
https://doi.org/10.3390/genes11070788
Nolte, W.; Weikard, R.; Brunner, R. M.; Albrecht, E.; Hammon, H. M.; Reverter, A.; Kühn, C. (2020):
Identification and annotation of potential function of regulatory antisense long non-coding RNAs related to feed efficiency in Bos taurus bulls. Int J Mol Sci 21 (9): 3292,1-14
https://doi.org/10.3390/ijms21093292
Galow, A.-M.; Wolfien, M.; Müller, J.; Bartsch, M.; Brunner, R. M.; Hoeflich, A.; Wolkenhauer, O.; David, R.; Goldammer, T. (2020):
Integrative cluster analysis of whole hearts reveals proliferative cardiomyocytes in adult mice. Cells-Basel 9 (5): 1144,1-16
https://doi.org/10.3390/cells9051144
Wolfien, M.; Galow, A.-M.; Müller, J.; Bartsch, M.; Brunner, R. M.; Goldammer, T.; Wolkenhauer, O.; Höflich, A.; David, R. (2020):
Single nuclei sequencing of entire mammalian hearts: strain-dependent cell type composition and velocity. Cardiovasc Res 116 (7): 1249-1251
https://doi.org/10.1093/cvr/cvaa054
Wolfien, MW; Galow, A.-M.; Müller, P.; Bartsch, M.; Brunner, R. M.; Goldammer, T.; Wolkenhauer, O.; Höflich, A.; David, R. (2020):
Single-nucleus sequencing of an entire mammalian heart: cell type composition and velocity. Cells-Basel 9 (2): 318,1-6
https://doi.org/10.3390/cells9020318
Koll, R.; Martorell Ribera, J.; Brunner, R. M.; Rebl, A.; Goldammer, T. (2020):
Gene profiling in the adipose fin of salmonid fishes supports its function as a flow sensor. Genes-Basel 11 (1): 21, 1-22
https://doi.org/10.3390/genes11010021
Hiendleder, S.; Bottema, C.D.K.; Brunner, R. M. (2020):
Nuclear mitochondrial pseudogenes in the cattle genome. Anim Genet 51 (1): 148-149
https://doi.org/10.1111/age.12869
Martorell Ribera, J.; Nipkow, M.; Viergutz, T.; Brunner, R. M.; Bochert, R.; Koll, R.; Goldammer, T.; Gimsa, U.; Rebl, A. (2020):
Early response of salmonid head-kidney cells to stress hormones and toll-like receptor ligands. Fish Shellfish Immun 98: 950-961
https://doi.org/10.1016/j.fsi.2019.11.058
Nguinkal, J. A.; Brunner, R. M.; Verleih, M.; Rebl, A.; de los Rios Pérez, L.; Schäfer, N.; Hadlich, F.; Stüeken, M.; Wittenburg, D.; Goldammer, T. (2019):
The first highly contiguous genome assembly of pikeperch (Sander lucioperca), an emerging aquaculture species in Europe. Genes-Basel 10: 708, 1-14
https://doi.org/10.3390/genes10090708
Nolte, W.; Weikard, R.; Brunner, R. M.; Albrecht, E.; Hammon, H. M.; Kühn, C. (2019):
Biological network approach for the identification of regulatory long non-coding RNAs associated with metabolic efficiency in cattle. Front Genet 10: 1130, 1-19
https://doi.org/10.3389/fgene2019.01130