Julien Alban Nguinkal, M.Sc.

+49 38208 68-702
Research Institute for Farm Animal Biology (FBN)
Institute of Genome Biology
Wilhelm-Stahl-Allee 2
18196 Dummerstorf

Research interests

  • Pipelines for high quality de-novo genome assembly and annotation
  • Identification and analysis of genomic markers (e.g. PSG genes,  SNPs, microsatellites etc.) in Sander lucioperca population
  • Analysis of NGS data

Curriculum Vitae

  • Since 2017:  PhD Student (Institute of Genome Biology), Leibniz Institute for Farm Animal Biology (FBN), Germany.
  • 2015- 2017: Master degree in Bioinformatics, University of Jena,  Germany
  • 2014: Internship at Boehringer-Ingelheim Pharma GmbH & Co. KG, Biberach/Germany
  • 2009-2013 : Bachelor degree in Bioinformatics & Genome Research, University of Bielefeld, Germany

Publications

Schäfer, N.; Kaya, Y.; Rebl, H.; Stüecken, M.; Rebl, A.; Nguinkal, J. A.; Franz, G. P.; Brunner, R. M.; Goldammer, T.; Grunow, B.; Verleih, M. (2021):
Insights into early ontogenesis: characterization of stressand development key genes of pikeperch (Sander lucioperca) in vivo and in vitro. Fish Physiol Biochem 47 (2): 515-532
https://doi.org/10.1007/s10695-021-00929-6
Nguinkal, J. A.; Verleih, M.; de los Rios Pérez, L.; Brunner, R. M.; Sahm, A.; Bej, S.; Rebl, A.; Goldammer, T. (2021):
Comprehensive Characterization of Multitissue Expression Landscape, Co-Expression Networks and Positive Selection in Pikeperch. Cells-Basel 11 (9): 610353, 1-16
https://doi.org/10.3390/cells10092289
Goldammer, T.; Verleih, M.; Brunner, R. M.; Rebl, A.; Nguinkal, J. A.; de los Rios Pérez, L.; Schäfer, N.; Stüecken, M.; Swirplies, F.; Wittenburg, D. (2021):
Pikeperch genome data – basis for the smart farming in aquaculture. Mitteilungen der Landesforschungsanstalt für Landw (63): 125-133
https://www.landwirtschaft-mv.de/static/LFA/Dateien/Hefte/MdLFA_Heft63.pdf
de los Rios Pérez, L.; Nguinkal, J. A.; Verleih, M.; Rebl, A.; Brunner, R. M.; Klosa, J.; Schäfer, N.; Stüeken, M.; Goldammer, T.; Wittenburg, D. (2020):
An ultra-high density SNP-based linkage map for enhancing the pikeperch (Sander lucioperca) genome assembly to chromosome-scale. Sci Rep-UK 10 (22335): 1-13
https://doi.org/10.1038/s41598-020-79358-z
Nguinkal, J. A.; Brunner, R. M.; Verleih, M.; Rebl, A.; de los Rios Pérez, L.; Schäfer, N.; Hadlich, F.; Stüeken, M.; Wittenburg, D.; Goldammer, T. (2019):
The first highly contiguous genome assembly of pikeperch (Sander lucioperca), an emerging aquaculture species in Europe. Genes-Basel 10: 708, 1-14
https://doi.org/10.3390/genes10090708